BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031G09LP1|AL429460
(945 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig152 191 3e-48
>3x_Contig152
Length = 823
Score = 191 bits (95), Expect = 3e-48
Identities = 164/190 (86%), Gaps = 6/190 (3%)
Strand = Plus / Plus
Query: 747 taccagcattcttagaatgattaaatgaacaataattatataatttwtdattawtaaatt 806
|||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 1 taccagcattcttagaatgattaaatgaacaataattatataatttataattaataaatt 60
Query: 807 atatatartgngkbbskkkscctgc-vamcctacaatattattargggttt-cccacggt 864
||||||| | ||||| | ||||||||||||||| |||||| ||||||||
Sbjct: 61 atatataataatattctttccctgcaaaccctacaatattattaggggtttccccacggt 120
Query: 865 cacytt-ccgacccacaargagacggggattcttactta-tttatat-ccgc-gattcat 920
||| || ||||||||||| |||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 121 caccttcccgacccacaaggagacggggattcttacttattttatatcccgcggattcat 180
Query: 921 gttatgaatc 930
||||||||||
Sbjct: 181 gttatgaatc 190
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9801
Number of Sequences: 1807
Number of extensions: 9801
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)